Base game
- The Penguins of Madagascar 100% Complete Collect all Bronze, Silver, and Gold Trophies. 13.9%Very rare
- Mango Mania Complete the "Mango Mania" level. 94.2%Common
- Party Favor Hunt Complete the "Party Favor Hunt" level. 87.9%Common
- Throne Piece Pursuit Complete the "Throne Piece Pursuit" level. 83.3%Common
- Party Planner Complete the "Party Planner" level. 68.5%Common
- Guest Quest Complete the "Guest Quest" level. 62.6%Common
- Monkey Business Complete the "Monkey Business" level. 57.8%Common
- Burt's Beacon Complete the "Burt's Beacon" level. 55.6%Common
- Chameleon Catch Complete the "Chameleon Catch" level. 49.1%Rare
- Rescue Roger Complete the "Rescue Roger" level. 47.1%Rare
- Mission Control Complete the "Mission Control" level. 43.9%Rare
- Dr. Blowhole's Base Complete the "Dr. Blowhole's Base" level. 42.8%Rare
- AWOL Complete the "AWOL" level. 41.7%Rare
- Asphalt Jungle Complete the "Asphalt Jungle" level. 40.6%Rare
- Find the Robot Parts Complete the "Find the Robot Parts" level. 38.4%Rare
- Find the Robot Parts, Part II Complete the "Find the Robot Parts, Part II" level. 36.9%Rare
- Penguins vs. Penguins Complete the "Penguins vs. Penguins" level. 35.2%Rare
- Security Breach Complete the "Security Breach" level. 34.5%Rare
- Mission: Marlene Complete the "Mission: Marlene" level. 33.9%Rare
- Diabolical Traps Complete the "Diabolical Traps" level. 33.1%Rare
- Showdown with Dr. Blowhole Complete the "Showdown with Dr. Blowhole" level. 32.3%Rare
- Julien's Mango Mash Complete all levels in the "Julien's Mango Mash" story. 62.5%Common
- The Crystal Staff of the Lemurkhamen Complete all levels in "The Crystal Staff of the Lemurkhamen" story. 42.8%Rare
- Revenge of the Robo-Penguins Complete all levels in the "Revenge of the Robo-Penguins" story. 35.2%Rare
- Dr. Blowhole!? Complete all levels in the "Dr. Blowhole!?" story. 32.3%Rare
- Operation Complete Complete all levels in The Penguins of Madagascar. 32.3%Rare
- Shaved Ice Collect 1000 snowcones. 88.1%Common
- Rainbow Flavor is the Best Collect 5000 snowcones. 59.2%Common
- Chameleon Keeper Find all of the Chameleons. 15.5%Rare
- Bargain Shopper Buy every item from King Julien's Store. 22.2%Rare
- King of Pins Bowl a 200 in Mort Bowling. 16.4%Rare
- Number One Ninja Defeat a total of 1000 Ninja Pins in Ninja-Knockdown. 14.8%Very rare
- Shake Your Rear End Score a total 100,000 points in King Julien's Dance Party. 18.6%Rare
Trophy names, descriptions and rarity come from PlayStation. Guides open on their authors' own websites.